PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004510971.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 408aa    MW: 45695.7 Da    PI: 6.9358
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004510971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48e-11345389654
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +++Er RR ri  ++ +L +l P +    +k  s a++L +AveYIk+L
  XP_004510971.1 345 SIAERERRIRISARIKKLHDLFPIS----DKQTSTADMLDLAVEYIKDL 389
                     689*********************9....788***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.681339389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.77E-13342401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.75E-11343394No hitNo description
Gene3DG3DSA:4.10.280.102.1E-11344400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-9345395IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-8345389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MSVVYTHALN NYEDVARKNT EMESKIGNSQ QHCHPNNPGL SRYSSAPSSL LTSLVDTRIG  60
FLNEETFRNY NHNQHYAPTT SSEMETMMTN SEPLYELEEK QVKHEEKDPF SQRLQYNGYS  120
YESSNQIIYQ PQMSQGLQNG SLALENYAQT KVGFSNNCSN LIRQKSSPAE FFSNYSVDNG  180
FASLGEVGSV RGCDVSNGQS ITSTSGLNGA LNFSSRPISC SIMMPQIVEN EHESLQANCI  240
KSRNIGNDNG NTKCNMPSFT NDYWDNSTFN AQKSATNSGE IIFSSSNALE TQDVDFGYQK  300
LGLTHHLSLP SSSTKMTTME KFFHTQGSVP CKIRAKRGFA THPRSIAERE RRIRISARIK  360
KLHDLFPISD KQTSTADMLD LAVEYIKDLR KQLELLTDTK AKCTCSSN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004510971.10.0PREDICTED: transcription factor bHLH130-like
TrEMBLA0A072TQD60.0A0A072TQD6_MEDTR; Transcription factor bHLH122-like protein
STRINGGLYMA13G27455.11e-176(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-31bHLH family protein